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Problem Set 4 - Next-generation sequencing

[Problem Set 4 PDF][Problem Set 4 Answer Key]

Overview

Data files and code templates for this problem set are available on comet at:

/oasis/projects/nsf/csd524/mgymrek/data/ps4/
/oasis/projects/nsf/csd524/mgymrek/templates/ps4/

You should make a directory for problem set 4 in your working directory with subdirectories for code and results:

mkdir /oasis/projects/nsf/csd524/$USER/ps4
mkdir /oasis/projects/nsf/csd524/$USER/ps4/code
mkdir /oasis/projects/nsf/csd524/$USER/ps4/results

PS4 data

The data directory contains the following files you will use in the problem set: For more info on these files:

PS4 templates

The templates directory contains: